Wednesday, April 23, 2014

Looking back and looking forward on HIV

AIDS discovery

Today is the 30th anniversary of the discovery of the Human Immunodeficiency Virus (HIV) -- the causative agent of Acquired Immunodeficiency Syndrome (AIDS). AIDS is one of the three worst plagues causing suffering in humans today (along with Malaria and Tuberculosis).  Over 35 million people are living with HIV, a staggering number considering that the disease moved from other primates to humans only 100 years ago. At the current rate, AIDS is a pandemic that we don’t yet have under control. (See the impact on society in this story by Geoffrey Cowley)

HIV outlook

Recent studies show that ramping up HIV diagnosis and prevention now will be cheaper and more effective at reducing the spread of HIV in the long run. In the absence of any new efforts--if we just keep doing what we’re doing--the number of people living with HIV could double to 70 million in 20 years.


HIV treatment has improved significantly, with a multi-faceted approach to managing the infection. There have even been a few cases of patients that are “functionally cured” a state where virus levels remain low well after treatment, although at this point a complete cure is not available. But there are dozens of vaccine trials under study right now that would either treat or prevent HIV infection and hopefully one of them could be the next HIV breakthrough.

Friday, April 4, 2014

Here There Be Dragons, Indeed



Body odor 
We all have it. We all try to avoid it. Body odor from ourselves and especially from others can be a suffocating insult to our delicate olfactory senses. But the blame for bad B.O. falls squarely on the bacteria that take up residence on our skin. So, if you want to smell better, then avoiding the bad bacteria is the key. 

Body odor can have unintended consequences
There are times when body odors remind of us of another smell, like cheese or chicken soup and then the connection of body odor can make a favorite food suddenly become unpalatable. Even worse, there are times when body odor can be the breaking point in a relationship. But each of those smells is from chemicals made by just a few odorific bacteria living near your sweat glands and living off the organic molecules in your sweat. 

Eaters of the Sweat
Odor starts with the sweat secreted by the apocrine sweat glands (these sweat glands are specific to the armpits, genitals and areolas; eccrine sweat glands are located all over the body). Apocrine glands are triggered, of course, by a range of stimuli including heat, fear and stress. The sweat we release consists of a variety of organic compounds, primarily branched fatty acids and steroid derivatives. These molecules on their own have little to no scent and do not offend our sense of smell, but they serve as growth substrates for bacteria living on our skin.

It is amazing, and perhaps a bit disconcerting, to consider that there are bacteria loitering on your skin waiting for you to overheat or feel anxious, so that the molecules in your sweat can feed them. But there are. And by recognizing the bacteria that do this, we can ask which organisms are the least offensive? Are there microbial reasons for particularly bad B.O.? Well, there are three main suspects: Corynebacterium sp.Propionibacteria sp., and Staphylococcus epidermidis

Which do you smell like?
It turns out each of the bacteria above tends to have a particular metabolic end product and a particular smell. S. epidermidis, for instance, feeds on the fatty acids we secrete and releases isovaleric acid, a chemical that is also present in several strong smelling cheeses like Camembert. So, if the B.O. is reminiscent of cheese, S. epidermidis is a likely culprit

If the smell is more like vinegar, than it likely comes from propionic acid made by the appropriately named Propionibacteria. There is little love lost between humans and this group of bacteria. In addition to smell, Propionibacterium acnes is one of the principal causes of acne, as they can take residence within the sebaceous glands on our face and simultaneously wreck havoc on our skin and social lives.

Finally, we have the Corynebacterium sp., the causative agent of some of the worst, foulest B.O. It can smell so bad it has a clinical name (apocrine bromhidrosis). These bacteria release butyric acid, which at its best may remind you of Parmesan cheese but it’s a smell that is rarely at its best.           


So, what can be done about B.O.? 
In some particularly bad cases, surgery, liposuction or botox have been used to remove or inhibit sweat production from apocrine glands. Yikes. 
Good hygiene is certainly the best first step to reducing B.O. You can use Anti-perspirants to block sweat glands and reduce the volume of sweat, but remember the body needs to sweat, so 100% anti-perspiration is a bad idea. 
Deodorants contain some anti-bacterial compounds that can inhibit bacterial growth, but the action is not targeted at the main culprits above. Also, deodorants can stop working over time so changing deodorant brands can compensate for suddenly increased odor. 
However, as our ability to distinguish good and bad microbial communities increases, a better option would be to treat bad bacteria with good bacteria. There are some interesting pro-biotic  and homemade deodorants out there. I wonder if anyone has had success with these. As a microbiologist, I'd be happy to recommend some bacteria that could make your sweat smell more sweet.